Items where Subject is "QR Microbiology"

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Al-Saedi, Fitua, Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, Vaz, Diana Pereira, Krachler, Anne Marie and Payne, S. M. (2016) Displacement of Pathogens by an Engineered Bacterium Is a Multifactorial Process That Depends on Attachment Competition and Interspecific Antagonism. Infection and Immunity, 84 (6). pp. 1704-1711. doi:10.1128/IAI.00020-16

Al-Saedi, Fitua, Vaz, Diana Pereira, Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943 and Krachler, Anne Marie (2017) 3-Sulfogalactosyl–dependent adhesion of Escherichia coliHS multivalent adhesion molecule is attenuated by sulfatase activity. Journal of Biological Chemistry, 292 (48). pp. 19792-19803. doi:10.1074/jbc.M117.817908

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Cichon, M, Szoellosi, E, Eens, M, Hasselquist, D, Kempenaers, B, Merino, S, Nillson, J A, Rossivall, B, Rytkonen, S, Torok, J, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Garamszegi, L Z (2011) Determinants of distribution and prevalence of avian malaria in blue tit populations across Europe: separating host and parasite effects. Journal of Evolutionary Biology, 24 (9). pp. 2014-2024. doi:10.1111/j.1420-9101.2011.02339.x

Cosgrove, Catherine L, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396, Day, Karen P and Sheldon, Ben C (2008) Seasonal variation in Plasmodium prevalence in a population of blue tits Cyanistes caeruleus. Journal of Animal Ecology, 77 (3). pp. 540-548. doi:10.1111/j.1365-2656.2008.01370.x

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Dashti, Ali A, Vali, Leila ORCID: https://orcid.org/0009-0000-7740-3703, Shamsah, Sara, Jadaon, Mehrez and ElShazly, Sherief (2024) Genomic Characteristics of an Extensive-Drug-Resistant Clinical Escherichia coli O99 H30 ST38 Recovered from Wound. Iranian Journal of Pharmaceutical Research, 23 (1). e143910. doi:10.5812/ijpr-143910

Dashti, Khadijah M, Vali, Leila ORCID: https://orcid.org/0009-0000-7740-3703, Almaraghi, Norya, Ebrahim, Hussain, Abul, Hassan and Dashti, Ali A (2024) Antibiotic-Producing Bacteria Collected from Seawater. Microbiology Research, 15 (4). pp. 2381-2393. doi:10.3390/microbiolres15040160

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Faghihinia, Maede, Zou, Yi, Bai, Yongfei, Dudáš, Martin, Marrs, Rob and Staddon, Philip L. ORCID: https://orcid.org/0000-0002-7968-3179 (2022) Grazing Intensity Rather than Host Plant’s Palatability Shapes the Community of Arbuscular Mycorrhizal Fungi in a Steppe Grassland. Microbial Ecology, 84. pp. 1062-1071. doi:10.1007/s00248-021-01920-7

Faghihinia, Maede, Zou, Yi, Chen, Zheng, Bai, Yongfei, Li, Wenhuai, Marrs, Rob and Staddon, Philip L. ORCID: https://orcid.org/0000-0002-7968-3179 (2020) Environmental drivers of grazing effects on arbuscular mycorrhizal fungi in grasslands. Applied Soil Ecology, 153. Art No 103591. doi:10.1016/j.apsoil.2020.103591

Faghihinia, Maede ORCID: https://orcid.org/0000-0002-8953-1945, Jansa, Jan, Halverson, Larry J. and Staddon, Philip L. ORCID: https://orcid.org/0000-0002-7968-3179 (2022) Hyphosphere microbiome of arbuscular mycorrhizal fungi: a realm of unknowns. Biology and Fertility of Soils, 59. pp. 17-34. doi:10.1007/s00374-022-01683-4

Farzand, Robeena, Haigh, Richard D., Monk, Philip, Haldar, Pranabashis, Patel, Hemu, Pareek, Manish, Verma, Raman, Barer, Michael R., Woltmann, Gerrit, Ahyow, Lauren, Jagatia, Heena, Decker, Jonathan ORCID: https://orcid.org/0000-0001-5904-7311, Mukamolova, Galina V., Cooper, Andrea M., Garton, Natalie J., O’Hare, Helen M. and Stallings, Christina L. (2022) A Persistent Tuberculosis Outbreak in the UK Is Characterized by Hydrophobic fadB4 -Deficient Mycobacterium tuberculosis That Replicates Rapidly in Macrophages. mBio, 13 (6). Art 02656. doi:10.1128/mbio.02656-22

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Garelnabi, Mariam, Taylor-Smith, Leanne M., Bielska, Ewa, Hall, Rebecca A., Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943 and May, Robin C. (2018) Quantifying donor-to-donor variation in macrophage responses to the human fungal pathogen Cryptococcus neoformans. PLoS ONE, 13 (3). e0194615. doi:10.1371/journal.pone.0194615

Goodenough, Anne E ORCID: https://orcid.org/0000-0002-7662-6670 and Hart, Adam G ORCID: https://orcid.org/0000-0002-4795-9986 (2011) Microbiology of Bird Nest Boxes. Microbiologist, 12. pp. 28-31.

Goodenough, Anne E ORCID: https://orcid.org/0000-0002-7662-6670 and Stallwood, Bethan (2011) Differences in Culturable Microbial Communities in Bird Nestboxes According to Orientation and Influences on Offspring Quality in Great Tits (Parus major). Microbial Ecology, 63 (4). pp. 986-995. doi:10.1007/s00248-011-9992-7

Goodenough, Anne E ORCID: https://orcid.org/0000-0002-7662-6670 and Stallwood, Bethan (2010) Intraspecific Variation and Interspecific Differences in the Bacterial and Fungal Assemblages of Blue Tit (Cyanistes caeruleus) and Great Tit (Parus major) Nests. Microbial Ecology, 59 (2). pp. 221-232. doi:10.1007/s00248-009-9591-z

Goodenough, Anne E ORCID: https://orcid.org/0000-0002-7662-6670, Stallwood, Bethan, Dandy, Shantelle, Nicholson, Thomas, Stubbs, Hannah and Coker, David (2017) Like mother like nest: similarity in microbial communities of adult female Pied Flycatchers and their nests. Journal of Ornithology, 158 (1). pp. 233-244. doi:10.1007/s10336-016-1371-1

Greenshields-Watson, Alexander, Attaf, Meriem, MacLachlan, Bruce J., Whalley, Thomas, Rius, Cristina, Wall, Aaron, Lloyd, Angharad, Hughes, Hywel, Strange, Kathryn E., Mason, Georgina H., Schauenburg, Andrea J., Hulin-Curtis, Sarah L. ORCID: https://orcid.org/0000-0003-0889-964X, Geary, James, Chen, Yuan, Lauder, Sarah N., Smart, Kathryn, Vijaykrishna, Dhanasekaran, Grau, Miguel L., Shugay, Mikhail, Andrews, Robert, Dolton, Garry, Rizkallah, Pierre J., Gallimore, Awen M., Sewell, Andrew K., Godkin, Andrew J. and Cole, David K. (2020) CD4+ T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features. Cell Reports, 32 (2). ART 107885. doi:10.1016/j.celrep.2020.107885

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Hart, Adam G ORCID: https://orcid.org/0000-0002-4795-9986, Wisniewska, Kamila and Goodenough, Anne E ORCID: https://orcid.org/0000-0002-7662-6670 (2013) The surprising fungal diversity found in solitary bee nests. Microbiologist, 14 (2). pp. 14-16.

Hatchwell, Ben J, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396, Anwar, M and Perrins, C M (2000) The prevalence and ecology of the haematozoan parasites of European blackbirds, Turdus merula. Canadian Journal of Zoology, 78 (4). pp. 684-687. doi:10.1139/cjz-78-4-684

Huebinger, Ryan M., Do, D. H., Carlson, Deborah L., Yao, X., Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, de Souza Santos, Marcela, Vaz, Diana Pereira, Keen, E., Wolf, Steven E., Minei, J. P., Francis, K. P., Orth, Kim and Krachler, Anne Marie (2020) Bacterial adhesion inhibitor prevents infection in a rodent surgical incision model. Virulence, 11 (01). pp. 695-706. doi:10.1080/21505594.2020.1772652

Huebinger, Ryan M., Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, de Souza Santos, Marcela, Carlson, Deborah L., Song, Juquan, Vaz, Diana Pereira, Keen, Emma, Wolf, Steven E., Orth, Kim and Krachler, Anne Marie (2016) Targeting bacterial adherence inhibits multidrug-resistant Pseudomonas aeruginosa infection following burn injury. Scientific Reports, 6. p. 39341. doi:10.1038/srep39341

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Jindani, Amina, Atwine, Daniel, Grint, Daniel, Bah, Boubacar, Adams, Jack, Ticona, Eduardo Rómulo, Shrestha, Bhabana, Agizew, Tefera, Hamid, Saeed, Jamil, Bushra, Byamukama, Adolf, Kananura, Keneth, Mugisha Taremwa, Ivan, Bonnet, Maryline, Camara, Lansana Mady, Bah-Sow, Oumou Younoussa, Bah, Kindy Sadio, Bah, Nene Mamata, Sow, Maimouna, Ticona Huaroto, César Eduardo, Mugruza Pineda, Raquel, Tandukar, Bijesh, Raya, Bijendra Bhakta, Shrestha, Neko, Mathoma, Anikie, Mathebula-Modongo, Unami P., Basotli, Joyce, Irfan, Muhammad, Begum, Dilshad, Muzammil, Ammara, Ahmed, Imran, Hasan, Rumina, Burgos, Marcos V., Sultan, Faisal, Hassan, Mariam, Masood, Iqra, Robb, Claire, Decker, Jonathan ORCID: https://orcid.org/0000-0001-5904-7311, Grubnic, Sisa, Butcher, Philip D., Witney, Adam, Dhillon, Jasvir, Munshi, Tulika, Fielding, Katherine and Harrison, Thomas S. (2023) Four-Month High-Dose Rifampicin Regimens for Pulmonary Tuberculosis. NEJM Evidence, 2 (9). Art 2300054. doi:10.1056/EVIDoa2300054

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Knowles, Sarah C L, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396, Alves, Ricardo and Sheldon, Ben C (2014) Dispersal in a patchy landscape reveals contrasting determinants of infection in a wild avian malaria system. Journal of Animal Ecology, 83 (2). pp. 429-439. doi:10.1111/1365-2656.12154

Knowles, Sarah C L, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396, Alves, Ricardo, Wilkin, Teddy A, Bensch, Staffan and Sheldon, Ben C (2011) Molecular epidemiology of malaria prevalence and parasitaemia in a wild bird population. Molecular Ecology, 20 (5). pp. 1062-1076. doi:10.1111/j.1365-294X.2010.04909.x

Knowles, Sarah C L, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Sheldon, Ben C (2010) Context-dependent effects of parental effort on malaria infection in a wild bird population, and their role in reproductive trade-offs. Oecologia, 164 (1). pp. 87-97. doi:10.1007/s00442-010-1706-1

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Lachish, Shelley, Knowles, Sarah C L, Alves, Ricardo, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Sheldon, Ben C (2011) Fitness effects of endemic malaria infections in a wild bird population: the importance of ecological structure. Journal of Animal Ecology, 80 (6). pp. 1196-1206. doi:10.1111/j.1365-2656.2011.01836.x

Lachish, Shelly, Knowles, Sarah CL, Alves, Ricardo, Sepil, Irem, Davies, Alicia, Lee, Simon, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Sheldon, Ben C (2013) Spatial determinants of infection risk in a multi-species avian malaria system. Ecography, 36 (5). pp. 587-598. doi:10.1111/j.1600-0587.2012.07801.x

Lachish, Shelly, Knowles, Sarah CL, Alves, Ricardo, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Sheldon, Ben C (2011) Infection dynamics of endemic malaria in a wild bird population: parasite species-dependent drivers of spatial and temporal variation in transmission rates. Journal of Animal Ecology, 80 (6). pp. 1207-1216.

Liedvogel, Miriam, Szulkin, Marta, Knowles, Sarah C L, Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Sheldon, Ben C (2009) Phenotypic correlates of Clock gene variation in a wild blue tit population: evidence for a role in seasonal timing of reproduction. Molecular Ecology, 18 (11). pp. 2444-2456. doi:10.1111/j.1365-294X.2009.04204.x

Lim, Jenson, Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, Hawley, Catherine Alice, Watson, Charlie Anne and Krachler, Anne Marie (2014) Multivalent Adhesion Molecule 7 Clusters Act as Signaling Platform for Host Cellular GTPase Activation and Facilitate Epithelial Barrier Dysfunction. PLoS Pathogens, 10 (9). e1004421. doi:10.1371/journal.ppat.1004421

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Mahmoud, Rasha Y., Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, Li, Wenqin, Emara, Mohamed, El-domany, Ramadan A., Wang, Depu, Wang, Yili, Krachler, Anne Marie and Yu, Jun (2015) The Multivalent Adhesion Molecule SSO1327 plays a key role in Shigella sonnei pathogenesis. Molecular Microbiology, 99 (4). pp. 658-673. doi:10.1111/mmi.13255

Mateo-Estrada, Valeria, Vali, Leila ORCID: https://orcid.org/0009-0000-7740-3703, Hamouda, Ahmed, Evans, Benjamin A. and Castillo-Ramirez, Santiago (2022) Acinetobacter baumannii Sampled from Cattle and Pigs Represent Novel Clones. Microbiology Spectrum, 10 (4). doi:10.1128/spectrum.01289-22

Mohammed, Fiyaz, Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, Zarling, Angela L., Willcox, Carrie R., Shabanowitz, Jeffrey, Cummings, Kara L., Hunt, Donald F., Cobbold, Mark, Engelhard, Victor H. and Willcox, Benjamin E. (2017) The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status. Oncotarget, 8 (33). pp. 54160-54172. doi:10.18632/oncotarget.16952

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Pan, Daniel, Christopher, Martin, Joshua, Nazareth, Shirley, Sze, Amani, Al- Oraibi, Mayuri, Gogoi, Natalia, Grolmusova, Pip, Divall, Jonathan, Decker ORCID: https://orcid.org/0000-0001-5904-7311, Eve, Fletcher, Caroline, Williams, James, Hay, Rebecca F, Baggaley, Anne L, Wyllie, Iain, Stephenson, Erol, Gaillard, Laura B, Nellums, Tristan William, Clark, Jonathan Nguyen, Van- Tam, Benjamin J, Cowling, T. Déirdre, Hollingsworth, Laura, Gray, Michael, Barer and Manish, Pareek (2024) Defining within- host SARS- CoV- 2 RNA viral load kinetics during acute COVID- 19 infection within different respiratory compartments and their respective associations with host infectiousness: a protocol for a systematic review and meta- analysis. BMJ Open, 14 (12). e085127. doi:10.1136/bmjopen-2024-085127

Pan, Daniel, Williams, Caroline, Decker, Jonathan ORCID: https://orcid.org/0000-0001-5904-7311, Fletcher, Eve, Gromusova, Natalia, Bird, Paul, Martin, Christopher A, Nazareth, Joshua, Rahman, Latif, O'Kelly, Kate, Panchal, Rakesh, Musa, Irfana, Dhutia, Harshil, Sze, Shirley, Pareek, Manish and Barer, Michael R. (2024) Implementation of facemask sampling for the detection of infectious individuals with SARS-CoV-2 in high stakes clinical examinations – a feasibility study. Future Healthcare Journal, 11 (4). p. 100175. doi:10.1016/j.fhj.2024.100175

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Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, Al-Saedi, Fitua, Vaz, Diana, Perez-Soto, Nicolas and Krachler, Anne M. (2015) Biomimetic Materials to Characterize Bacteria-host Interactions. Journal of Visualized Experiments (105). e53400. doi:10.3791/53400

Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943, Fehr, Alexander G. J., Thompson, Laurel, Rocha, Jacqueline, Perez-Soto, Nicolas, Madhavan, Vipin T. P., Voelz, Kerstin, Krachler, Anne Marie and D'Orazio, Sarah E. F. (2017) Zebrafish (Danio rerio) as a Vertebrate Model Host To Study Colonization, Pathogenesis, and Transmission of Foodborne Escherichia coli O157. mSphere, 2. e00367-17. doi:10.1128/mSphereDirect.00365-17

Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943 and Krachler, A. M. (2016) Against the tide: the role of bacterial adhesion in host colonization. Biochemical Society Transactions, 44 (6). pp. 1571-1580. doi:10.1042/BST20160186

Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943 and Krachler, Anne Marie (2015) Dual function of a bacterial protein as an adhesin and extracellular effector of host GTPase signaling. Small GTPases, 6 (3). pp. 153-156. doi:10.1080/21541248.2015.1028609

Stones, Daniel H ORCID: https://orcid.org/0000-0002-8981-7943 and Krachler, Anne-Marie (2015) Fatal Attraction: How Bacterial Adhesins Affect Host Signaling and What We Can Learn from Them. International Journal of Molecular Sciences, 16 (2). pp. 2626-2640. doi:10.3390/ijms16022626

Sánchez, Berta, Iglesias, A, McVittie, A, Álvaro-Fuentes, J, Ingram, Julie ORCID: https://orcid.org/0000-0003-0712-4789, Mills, Jane ORCID: https://orcid.org/0000-0003-3835-3058, Lesschen, J P and Kuikman, P J (2016) Management of agricultural soils for greenhouse gas mitigation: Learning from a case study in NE Spain. Journal of Environmental Management, 170. pp. 37-49. doi:10.1016/j.jenvman.2016.01.003

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Tarekegn, Baye, Tientcheu, Leopold, Decker, Jonathan ORCID: https://orcid.org/0000-0001-5904-7311, Bell, Andrew, Mukamolova, Galina V., Kampmann, Beate, Messele, Gashaw, Abeje, Tadeye, Aseffa, Abraham, Dockrell, Hazel M, Haldar, Pranabashis, Barer, Michael R and Garton, Natalie J (2024) Host and pathogen factors that influence variability of Mycobacterium tuberculosis lipid body content in sputum from patients with tuberculosis: an observational study. Lancet Microbe, 5 (9). Art 100885. doi:10.1016/S2666-5247(24)00108-3

Timothy, Fredsgaard-Jones, Stephanie A., Harris, Hazel M, Morrison, Alberta, Ateere, Beatrice, Nassanga, Raquel, Lopez Ramon, Celia, Mitton, Eve, Fletcher, Jonathan, Decker ORCID: https://orcid.org/0000-0001-5904-7311, Hannah, Preston-Jones, Susan, Jackson, Andrew, Mawer, Iman, Satti, Michael, Barer, Timothy, Hinks, Henry, Bettinson and Helen, McShane (2024) A dose escalation study to evaluate the safety of an aerosol BCG infection in previously BCG-vaccinated healthy human UK adults. Frontiers in Immunology, 15. doi:10.3389/fimmu.2024.1427371

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Vigani, Mauro ORCID: https://orcid.org/0000-0003-2442-7976, Parisi, Claudia, Rodríguez-Cerezo, Emilio, Barbosa, Maria J., Sijtsma, Lolke, Ploeg, Matthias and Enzing, Christien (2015) Food and feed products from micro-algae: Market opportunities and challenges for the EU. Trends in Food Science and Technology, 42 (1). pp. 81-92. doi:10.1016/j.tifs.2014.12.004

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Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396, Childs, Dylan Z, Davies, Alicia S, Hellgren, Olof, Cornwallis, Charlie K, Perrins, Chris M and Sheldon, Ben C (2013) The epidemiology underlying age-related avian malaria infection in a long-lived host: the mute swan Cygnus olor. Journal of Avian Biology, 44 (4). pp. 347-358. doi:10.1111/j.1600-048X.2013.00091.x

Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396 and Cosgrove, Catherine L (2006) The hitchhiker's guide to avian malaria. Trends in Ecology and Evolution, 21 (1). pp. 5-7. doi:10.1016/j.tree.2005.11.001

Wood, Matthew J ORCID: https://orcid.org/0000-0003-0920-8396, Cosgrove, Catherine L, Wilkin, Teddy A, Knowles, Sarah C L, Day, Karen P and Sheldon, Ben C (2007) Within-population variation in prevalence and lineage distribution of avian malaria in blue tits, Cyanistes caeruleus. Molecular Ecology, 16 (15). pp. 3263-3273. doi:10.1111/j.1365-294X.2007.03362.x

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Xinyu Li, Amber, Jianyuan Zeng, Jimmy, Martin, Tracey A, Ye, Lin, Ruge, Fiona, Sanders, Andrew J ORCID: https://orcid.org/0000-0002-7997-5286, Khan, Elyas, Ping Dou, Q, Davies, Eleri and Jiang, Wen G (2023) Striatins and STRIPAK complex partners in clinical outcomes of patients with breast cancer and responses to drug treatment. Chinese Journal of Cancer Research, 35 (4). pp. 365-385. doi:10.21147/j.issn.1000-9604.2023.04.04